PE WGS Illumina sequencing of Entamoeba moshkovskii strain FIC, origi... - SRA

SRX6818695: PE WGS Illumina sequencing of Entamoeba moshkovskii strain FIC, originally mapped to Entamoeba moshkovskii Laredo 454 Genome Assembly
1 ILLUMINA (Illumina MiSeq) run: 31.9M spots, 6.4G bases, 3.4Gb downloads

Design: DNA from axenic culture grown in LYI-S-2 media, extracted using adapted CTAB phenol-chloroform extraction method. 100bp library prepared and sequenced using TruSeq DNA sample prep low throughput protocol.

Submitted by: University of Liverpool

Study: Entamoeba moshkovskii Laredo genome sequencing and assembly

PRJNA407662 • SRP221037 • All experiments • All runs

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Recent studies have suggested that Entamoeba moshkovskii is capable of causing symptomatic amoebiasis in human hosts. We sequenced and performed a de novo assembly of Entamoeba moshkovskii Laredo, and mapped to it reads from 3 more strains - FIC, 15114, and 'Snake' - in order to investigate the virulence properties of strains of this species.

Sample: Entamoeba moshkovskii strain FIC

SAMN07660613 • SRS5362239 • All experiments • All runs

Organism: Entamoeba moshkovskii

Library:

Name: Em_FIC

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 31.9M spots, 6.4G bases, 3.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR10085687	31,880,353	6.4G	3.4Gb	2019-09-09

ID:: 8979652

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